Research

Current Research Projects

Parametric Anatomical Models

Shape parameter networks were developed to provide a method for producing space-filling multi-object anatomical shape models that guarantee boundary consistency without resorting to an expensive optimization process.  A shape parameter network is a directed acyclic graph whose nodes are shape parameters.  Each shape parameter represents scalar, vector, or tensor data that characterizes some aspect of an object's shape.  An initial proof-of-concept model has been constructed for the human eye, which produces a volumetric representation of an eye from 30 input parameter values and a number of shape constraints built into the model.  

 

Adaptive Subdivision for Rendering Quadratic Tetrahedal Finite Element Models

A technique has been developed to adaptively subdivide quadratic triangular faces, such as those found in the quadratic tetrahedral elements of many finite element models.  The number of subdivisions varies based on a curvature metric in order to accurately represent the curved nature of the face while keeping the number of rendered linear triangles to a minimum.  A "snapping" scheme is employed to prevent holes from forming on the rendered surface along the border of areas with different levels of subdivision.  Various curvature metrics have implemented and compared for efficiency.

 

Fast Cutting of Volumetric Tetrahedral Meshes

A method has been developed for creating smooth cuts through the full or partial thickness of a volumetric finite element model.  A key benefit of this method is that it operates without generating large numbers of new vertices, thus preventing the complexity of the model from growing quickly with successive cuts.

 

Virtual Reality in Gait Rehabilitation

An innovative gait rehabilitation system was developed that combines the use of advanced rehabilitation techniques with a virtual reality (VR) training environment.  The VR-Gait system consists of VR software that generates and displays a dynamic urban environment on a large high definition television mounted in front of a treadmill.  The treadmill is paired with an overhead suspension device that can provide a patient with partial weight support.  Inertial tracking is used to actively monitor a patient’s posture during a training session and prompt auditory cues that encourage a patient to maintain correct walking posture.  This project aims to demonstrate that improved gait rehabilitation can be accomplished using a VR environment composed of widely available, relatively inexpensive, and unobtrusive hardware components. A validation study with stroke patients is currently ongoing.

 

 

Polar Stratospheric Cloud Visualization

The CALIPSO satellite launched by NASA in 2006 uses an onboard lidar instrument to measure the vertical distribution of clouds and aerosols along the orbital path.  This satellite’s dense vertical sampling of the atmosphere provides previously unavailable information about the altitude and composition of clouds, including the polar stratospheric clouds (PSCs) that play an important role in the annual formation of polar ozone holes.  Reconstruction of cloud surfaces through interpolation of CALIPSO data is challenging due to the sparsity of the data in the non-vertical dimensions and the complex sampling pattern created by intersecting non-planar orbital paths.  This research project has focused on developing  a method for computing cloud surfaces via shape-based interpolation of the cloud contours on each cross-section.  This method successfully interpolated cloud contours from CALIPSO data acquired during the 2006 polar winter and enabled three dimensional visualization of the PSCs.       

 

 

Interactive Body of Water Simulators (iBOWs)

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The iBOWS project aims to provide an intuitive and interactive interface to robust numerical models that represent bodies of water. This project extends the Chesapeake Bay Interactive Model, described below, to include additional interactive features and a variety of new and customizable models.  The Great Lakes are included in the set of target models.

 

Previous Research Projects

Chesapeake Bay Interactive Model

A scaled-down research grade numerical model of the Chesapeake Bay is connected to an intuitive graphical user interface.  The resulting program allows users to interactively vary river flow and wind conditions in the Bay and visualize the results.  A proof-of-concept product is available for download.  Envisioned primarily as a teaching tool, this project also has potential to facilitate oceanographic research.  This project was initiated as a collaborative effort between the ODU Dept. of Oceanography and the Virginia Modeling, Analysis, and Simulation Center (VMASC).

 

Wound Debridement Simulator

 

This is a project currently under development by the medical modeling and simulation group at the Virginia Modeling, Analysis, and Simulation Center.  The wound debridement simulator uses real-time graphic rendering and 6 degree-of-freedom Phantom haptic force feedback to represent a virutal leg wound and the surgical instruments that would be used to debride it.  A virtual agent is availabe to provide suggestions and point out mistakes as a user works through the debridement procedure. 

 

Cataract Surgery Modeling

 

A deformable finite element model of the eye is being developed in collaboration with ophthalmologist John Merriam at Columbia University.  The goal is to predict the corneal deformation and astigmatism that result from cataract surgery incisions.

 

Needle Insertion Modeling

 

A research effort in collaboration with Allison Okamura, Chad Schneider, and Josh Wainer at Johns Hopkins University, this work is focused on modeling tissue deformation due to needle insertion.   Needle friction and cutting forces are being modeled in addition to deformation.  Initial validation experiments utilize a synthetic silicone rubber material to avoid the inhomogeneities of real tissue, and follow-up work may involve real tissue samples.  The goal is to create a validated, physics based model for simulation and planning of needle insertion procedures, such as brachytherapy.

 

Non-rigid Prostate Image Registration

 

Begun as my dissertation work at the University of North Carolina at Chapel Hill, this project focuses on automating the use of finite element analysis using medial shape models.  The motivating application was non-rigid registration of prostate brachytherapy images.  Collaborators include Marco Zaider and Gig Mageras at Memorial Sloan-Kettering Cancer Center